Mukherjee hails from Kolkata. He studied in South Point High School and Calcutta University. He went to the United States for higher studies and post-doctoral research. Mukherjee worked in Canada for several years and after returning to India joined in IIT-Kharagpur.[4] He works there as an associate professor at the Department of Geology and Geophysics and the School of Environmental Science and Engineering.[5][6]
Mukherjee is currently the associate professor of Indian Institute of Technology from March 2016. He was elected to the Geological Society of America International Committee.[8]
Mukherjee's works have been acknowledged nationally and internationally. He researched the subject of groundwater exploration for suitable and sustainable drinking water sources including arsenic and other contaminants. His research group developed an AI prediction model for detecting groundwater arsenic in the Ganges Delta.[10][11]
Mukherjee is regarded as one of the most well known hydrogeologists in South Asia. He has done field-based and numerical research on the quality and quantity of groundwater-sourced drinking water across India. He has significantly contributed to the recent advancement of groundwater research in India. Mukherjee's recent research work has significantly contributed to support and evaluate the Government of India's missions like MNREGA on groundwater rejuvenation in India.[12] His research work on geological and human influences on groundwater pollution (arsenic, pesticide, sanitation-sourced pollution) in the Indus-Ganga-Brahmaputra river basins has attracted wide national and international attention.[13][14]
Mukherjee, A., Scanlon, B. R., Aureli, A., Langan, S., Guo, H., & McKenzie, A. A. (Eds.). (2020). Global groundwater: source, scarcity, sustainability, security, and solutions. Elsevier.[17]
Mukherjee, Abhijit, ed. Riverine Systems : Understanding the Hydrological, Hydrosocial and Hydro-Heritage Dynamics. Cham, Switzerland: Springer, 2022. Print.[18][19]
Mukherjee, A. (ed.), 2018. Groundwater of South Asia.Springer, ISBN978-981-10-3888-4, 799 pgs.
Ramanathan, A., Johnston, S., Mukherjee, A., Nath, B. (eds.), 2015. Safe and sustainability use of arsenic-contaminated aquifers in the Gangetic plain. Springer, ISBN978-3-319-16123-5.